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Creators/Authors contains: "Adam, S."

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  1. The proof of Witten's finiteness conjecture established that the Kauffman bracket skein modules of closed $$3$$-manifolds are finitely generated over $$\Q(A)$$. In this paper, we develop a novel method for computing these skein modules. We show that if the skein module $$S(M,\Q[A^\pmo])$$ of $$M$$ is tame (e.g. finitely generated over $$\Q[A^{\pm 1}]$$), and the $$SL(2, \C)$$-character scheme is reduced, then the dimension $$\dim_{\Q(A)}\, S(M, \Q(A))$$ is the number of closed points in this character scheme. This, in particular, verifies a conjecture in the literature relating $$\dim_{\Q(A)}\, S(M, \Q(A))$$ to the Abouzaid-Manolescu $$SL(2,\C)$$-Floer theoretic invariants, for infinite families of 3-manifolds. We prove a criterion for reducedness of character varieties of closed $$3$$-manifolds and use it to compute the skein modules of Dehn fillings of $(2,2n+1)$-torus knots and of the figure-eight knot. The later family gives the first instance of computations of skein modules for closed hyperbolic 3-manifolds. We also prove that the skein modules of rational homology spheres have dimension at least $$1$$ over $$\Q(A)$$. 
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    Free, publicly-accessible full text available May 1, 2026
  2. Thibault, Guillaume (Ed.)
    Molecular chaperones play a central role in maintaining protein homeostasis. The highly conserved Hsp70 family of chaperones have major functions in folding of nascent peptides, protein refolding, and protein aggregate disassembly. In yeast, loss of two Hsp70 proteins, Ssa1 and Ssa2, is associated with decreased cellular growth and shortened lifespan. While heterologous or mutant temperature-sensitive proteins form anomalous large cytoplasmic inclusions in ssa1Δssa2Δ strains, it is unclear how endogenous wild-type proteins behave and are regulated in the presence of limiting Hsp70s. Using the wild-type yeast Poly A binding protein (Pab1), which is involved in mRNA binding and forms stress granules (SGs) upon heat shock, Pab1 forms large inclusions in approximately half of ssa1Δssa2Δ cells in the absence of stress. Overexpression of Ssa1, Hsp104, and Sis1 almost completely limits the formation of these large inclusions in ssa1Δssa2Δ, suggesting that excess Ssa1, Hsp104, and Sis1 can each compensate for the lower levels of Ssa proteins. Upon heat shock, SGs also form in cells whether large Pab1 inclusions are present or not. Surprisingly, cells containing only SGs disassemble faster than wild type, whereas cells with both large inclusions disassemble slower albeit completely. We suspect that disassembly of these large inclusions is linked to the elevated heat shock response and elevated Hsp104 and Sis1 levels in ssa1Δssa2Δ strains. We also observed that wild-type cultures grown to saturation also form large Pab1-GFP inclusions. These inclusions can be partially rescued by overexpression of Ssa1. Taken together, our data suggest that Hsp70 not only plays a role in limiting unwanted protein aggregation in normal cells, but as cells age, the depletion of active Hsp70 possibly underlies the age-related aggregation of endogenous proteins. 
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    Free, publicly-accessible full text available June 1, 2026
  3. Sixty-five species and nine indeterminate taxa of Florida Paleogene echinoids are discussed, and their geographic and stratigraphic distributions provided. These include 49 species documented from the Eocene and 16 from the Oligocene. Ten new species are described: Prionocidaris robertsi n. sp., Rhyncholampas mariannaensis n. sp., Rhyncholampas bao n. sp., Weisbordella inglisensis n. sp., Weisbordella libum n. sp., Durhamella tetrapora n. sp., and Brissus jonesi n. sp. from the Eocene; and Plagiobrissus cassadyi n. sp., Eupatagus dumonti n. sp., and Schizaster carlsoni n. sp. from the Oligocene. We reconsidered subjective junior synonyms of all species and resurrect Neolaganum archerensis, Echinocyamus macneili, and Eupatagus mooreanus. Furthermore, we updated the taxonomy for all included species and their known distributions and provide emended diagnoses for the genera and species of Florida Neolaganidae. In addition, we herein report the occurrence of Porpitella micra in Cretaceous strata of the subsurface of Florida. This remarkable finding makes P. micra the earliest known of all the scutelloids. Echinoids within the Ocala Limestone are placed in five echinoid biozones, which are defined within, these include the Oligopygus phelani, Oligopygus haldemani, Oligopygus wetherbyi, Wythella eldridgei, and Haimea brooksi Zones. This document complements the Neogene (including the Quaternary) fossil echinoid fauna of Florida we published in 2020 and represents a compilation of the known Florida Paleogene echinoid record. The region is currently known to have the most speciose and diverse assemblage of Paleogene echinoids in the United States. 
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    Free, publicly-accessible full text available February 17, 2026
  4. Free, publicly-accessible full text available January 1, 2026
  5. Free, publicly-accessible full text available August 13, 2026
  6. Modern recordings of neural activity provide diverse observations of neurons across brain areas, behavioral conditions, and subjects; presenting an exciting opportunity to reveal the fundamentals of brain-wide dynamics. Current analysis methods, however, often fail to fully harness the richness of such data, as they provide either uninterpretable representations (e.g., via deep networks) or oversimplify models (e.g., by assuming stationary dynamics or analyzing each session independently). Here, instead of regarding asynchronous neural recordings that lack alignment in neural identity or brain areas as a limitation, we leverage these diverse views into the brain to learn a unified model of neural dynamics. Specifically, we assume that brain activity is driven by multiple hidden global sub-circuits. These sub-circuits represent global basis interactions between neural ensembles—functional groups of neurons—such that the time-varying decomposition of these sub-circuits defines how the ensembles’ interactions evolve over time non-stationarily and non-linearly. We discover the neural ensembles underlying non-simultaneous observations, along with their non-stationary evolving interactions, with our new model, CREIMBO (Cross-Regional Ensemble Interactions in Multi-view Brain Observations). CREIMBO identifies the hidden composition of per-session neural ensembles through novel graph-driven dictionary learning and models the ensemble dynamics on a low-dimensional manifold spanned by a sparse time-varying composition of the global sub-circuits. Thus, CREIMBO disentangles overlapping temporal neural processes while preserving interpretability due to the use of a shared underlying sub-circuit basis. Moreover, CREIMBO distinguishes session-specific computations from global (session-invariant) ones by identifying session covariates and variations in sub-circuit activations. We demonstrate CREIMBO’s ability to recover true components in synthetic data, and uncover meaningful brain dynamics in human high-density electrode recordings, including cross-subject neural mechanisms as well as inter- vs. intra-region dynamical motifs. Furthermore, using mouse whole-brain recordings, we show CREIMBO’s ability to discover dynamical interactions that capture task and behavioral variables and meaningfully align with the biological importance of the brain areas they represent 
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    Free, publicly-accessible full text available January 22, 2026
  7. We address three basic issues regarding the long-term dynamics of inequality in society. First, we consider the interpretation of residence sizes in socioeconomic terms by comparing statistical patterns extracted from the Global Dynamics of Inequality (GINI) Project database with those from the 21st-century United States. Second, we examine the degree to which the size and productivity of human networks is systematically related to inequality. Finally, we investigate relationships between productivity and productivity growth distributions for patterns of inequality and development across preindustrial societies. We find that across preindustrial societies residence size distributions provide a reasonable proxy for the distribution of productivity (income, a flow of physical and social resources to the group) and a minimum estimator for the distribution of wealth (a stock of such resources accumulated over time); that scale and productivity affect levels of inequality but account for only a small fraction of the observed variance across societies; and that inequality growth is independent of productivity growth, on average and over time. These findings have important implications for efforts to promote more equitable economic development in the present. 
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    Free, publicly-accessible full text available April 22, 2026
  8. Free, publicly-accessible full text available March 21, 2026
  9. Over the last 80 years, chlorine (Cl) has been the primary promoter of the ethylene epoxidation reaction valued at ~40 billion USD per year, providing a ~25% selectivity increase over unpromoted silver (Ag) (~55%). Promoters such as cesium, rhenium, and molybdenum each add a few percent of selectivity enhancements to achieve 90% overall, but their codependence on Cl makes optimizing and understanding their function complex. We took a theory-guided, single-atom alloy approach to identify nickel (Ni) as a dopant in Ag that can facilitate selective oxidation by activating molecular oxygen (O2) without binding oxygen (O) too strongly. Surface science experiments confirmed the facile adsorption/desorption of O2on NiAg, as well as demonstrating that Ni serves to stabilize unselective nucleophilic oxygen. Supported Ag catalyst studies revealed that the addition of Ni in a 1:200 Ni to Ag atomic ratio provides a ~25% selectivity increase without the need for Cl co-flow and acts cooperatively with Cl, resulting in a further 10% initial increase in selectivity. 
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    Free, publicly-accessible full text available February 21, 2026
  10. Cyclic polymers have applications across various fields, including material science, biomedicine, and inorganic chemistry. In this review we explore recent advances in the synthesis of cyclic polymers from alkyne monomers. 
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